BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015B10SP1|AL426801
(966 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig853 1735 0.0
>3x_Contig853
Length = 2329
Score = 1735 bits (868), Expect = 0.0
Identities = 888/902 (98%)
Strand = Plus / Plus
Query: 1 tgccctaaattgctattcttggaccgtacacggctgagcccatgactctgttttgagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1428 tgccctaaattgctattcttggaccgtacacggctgagcccatgactctgttttgagttt 1487
Query: 61 aatcaagagaatgtacataaatagaatcgaaataattggaatttgaatcacacacatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1488 aatcaagagaatgtacataaatagaatcgaaataattggaatttgaatcacacacatcac 1547
Query: 121 cacaccatgtcaacacaaaaacaaagaaagaaagccaaataacactccttaaactccctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1548 cacaccatgtcaacacaaaaacaaagaaagaaagccaaataacactccttaaactccctg 1607
Query: 181 taccgtcgagtaacatagatwatcagtwttcactggaagcwcataacataccagtgtgat 240
|||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||
Sbjct: 1608 taccgtcgagtaacatagataatcagtattcactggaagcacataacataccagtgtgat 1667
Query: 241 acgagtggcaacgtaatatcgcttagcattgttgctgttgactttataatcggtttattt 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1668 acgagtggcaacggaatatcgcttagcattgttgctgttgactttataatcggtttattt 1727
Query: 301 tagggacaaggaaccaagctttgwtctgtcattatcagcgatggaaccgcgaattgaaga 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1728 tagggacaaggaaccaagctttgatctgtcattatcagcgatggaaccgcgaattgaaga 1787
Query: 361 wacggatactggwtcactggcagataactcatcagttgcttcgtcggattcgaattattt 420
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1788 aacggatactggatcactggcagataactcatcagttgcttcgtcggattcgaattattt 1847
Query: 421 wttggwtttwgctgatgaaaccgagtwtgaggttatcttacccaagaccaactatcattc 480
|||| ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 1848 attggatttagctgatgaaaccgagtatgaggatatcttacccaagaccaactatcattc 1907
Query: 481 tccttattacgtgawcgttccgactcccaagcattctctcttggcaggagctggtgctaa 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1908 tccttattacgtgaacgttccgactcccaagcattctctcttggcaggagctggtgctaa 1967
Query: 541 cagtgccagtgctggtgccaattcaggagccggtaatgctaatatcagtgccagagctgg 600
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1968 cagtgccagtgctggtgccaattcaggagccggtaatgcaaatatcagtgccagagctgg 2027
Query: 601 tgctaatgttggtgtgggctcgggtgcaggtgctagtgccaatgctggaaaagctgaggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2028 tgctaatgttggtgtgggctcgggtgcaggtgctagtgccaatgctggaaaagctgaggg 2087
Query: 661 attagacttatatgatgatggtacagcgtcatttgtgcgagaatatcctactgatatctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2088 attagacttatatgatgatggtacagcgtcatttgtgcgagaatatcctactgatatctt 2147
Query: 721 ggcggataggtttcataaatggcggaagatcttgaaggcgatgatcatttatttgagaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2148 ggcggataggtttcataaatggcggaagatcttgaaggcgatgatcatttatttgagaga 2207
Query: 781 agttgcatattcgcaagaacaattcgcaagaatcaattattccttgaagaattctgtgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2208 agttgcatattcgcaagaacaattcgcaagaatcaattattccttgaagaattctgtgaa 2267
Query: 841 gttctcattcttgactgatttagatgaaagtactaacagagtctcagatccattgacgaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2268 gttctcattcttgactgatttagatgaaagtactaacagagtctcagatccattgacgaa 2327
Query: 901 ga 902
||
Sbjct: 2328 ga 2329
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6144
Number of Sequences: 1807
Number of extensions: 6144
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)